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Test for consistency of structures parsed from PDB, MMCIF and MMTF files #679

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Description

@lafita

The idea is to fill in the missing fields of BioJava structures loaded from PDB files in order to be able to convert them to complete equivalent MMCIF and MMTF formats.

A simple test should be reading in PDB file and writing in MMCIF or MMTF.

Activity

  1. added this to the BioJava 5.0.0 milestone on Jun 29, 2017
  2. josemduarte commented on Jun 30, 2017

    @josemduarte
    Contributor

    What would be the missing fields? The PDB files are loaded in the same data structure as mmCIF already, is there anything important that's missing? I do agree that the test would be great to have.

  3. modified the milestones: BioJava 5.0.0, on Mar 7, 2018
  4. added
    testingTest code and methods
    and removed
    enhancementImprovement of existing code or method
    on Mar 11, 2018
  5. lafita commented on Mar 11, 2018

    @lafita
    MemberAuthor

    Ok, let's create the test and see what is missing then.

  6. changed the title [-]Support compatibility of PDB files with MMTF and MMCIF[/-] [+]Test for consistency of structures parsed from PDB, MMCIF and MMTF files[/+] on Mar 12, 2018
  7. removed this from the 6.1.0 milestone on Oct 29, 2021
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